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scan-x is a software tool designed to find motifs (identified using motif-x) within any sequence data set. The first large scale scan was performed using all available human, mouse, fly and yeast phosphorylation and acetylation data to perform a scan for undiscovered sites.

Please cite the following:
Chou MF & Schwartz D (2011). Using the scan-x Web site to predict protein post-translational modifications. Curr Protoc Bioinformatics. Chapter 13:Unit 13.16. doi:10.1002/0471250953.bi1316s36.
PDF (608K) | PubMed

Schwartz D, Chou MF and Church GM (2009). Predicting protein post-translational modifications using meta-analysis of proteome-scale data sets. Mol Cell Proteomics 8(2):365-79.
PDF (2.4 M) | Supplemental Data | PubMed

Suggestions are always welcomed. Please e-mail Daniel Schwartz at daniel.schwartz(at)uconn.edu.

The software provided on this website may be used freely by users from academic and non-profit organizations. Users from the commercial sector should contact Daniel Schwartz (daniel.schwartz(at)uconn.edu).

website created by Michael Chou and Daniel Schwartz (Church Lab)
© 2005-2008 The President and Fellows of Harvard College.